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23 Open 67 Closed
23 Open 67 Closed
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Issues list

No @RG in bam files, so Picard cannot MergeDuplicates
#95 opened Oct 17, 2024 by markram4
DMRfind generates thousands of chunk.tsv files
#94 opened Aug 26, 2024 by MeganAdler
1
The result of DMRfind seem to be few compared with bw in IGV
#93 opened Aug 17, 2024 by liyangyang12
Call DMR using files in 10 bp bin format
#91 opened May 12, 2024 by Greacy-x
6
methylpy 1.4.7
#90 opened May 9, 2024 by liyangyang12
3
methylpy single-end-pipeline error
#88 opened Jan 25, 2024 by hengbingao
@yupenghe
2
methylpy call-methylation-state
#87 opened Sep 21, 2023 by MagdalenaWinklhofer
9
Double free or corruption error when running run_test.py
#86 opened Aug 1, 2023 by XunuoZhu
1
running reidentify-DMR on the DMRfind results
#85 opened May 17, 2023 by FarzanehRah
6
methylpy has took long time.
#83 opened Feb 20, 2023 by Biomamba
2
how to acquire or calculate the mapping efficiency using methylpy?
#82 opened Feb 13, 2023 by InfiniteLaugh
3
low align rate conflicting with bismark align rate
#81 opened Dec 16, 2022 by yinzhuo0322
4
NAs of methylpy add-methylation-level result
#80 opened Oct 17, 2022 by liyangyang12
5
DMR
#77 opened Jul 4, 2022 by liyangyang12
4
Methylpy in plant
#76 opened Mar 21, 2022 by zzh4399
7
mapping to a large genome
#75 opened Mar 8, 2022 by awieeeee
1
Help for parameters tuning.
#74 opened Sep 16, 2021 by ifishlin
Methylation calling in non-directional libraries
#73 opened Aug 20, 2021 by rbpisupati
1
bam-quality-filter NOMe-seq enhancement
#72 opened Aug 10, 2021 by sherryxuePKU
@yupenghe
2
Running RMS tests failed.
#70 opened Jun 16, 2021 by chenji333
18
cutadapt error for methylpy v 1.4.6
#69 opened Jun 9, 2021 by shahsam
3
add-methylation level not working
#48 opened Jan 14, 2020 by knoedlerj
12
Suggestions about methylpy
#28 opened Mar 25, 2019 by lhqing
2
ProTip! no:milestone will show everything without a milestone.